ianbed Goto Github PK
Type: User
ianbed's Projects
bbplot
R package that helps create and export ggplot2 charts in the style used by the BBC News data team
biscuit_snakemake_workflow
Snakemake Workflow For Running Biscuit https://github.com/huishenlab/biscuit
biscuiteer
tools for analysing Biscuit (https://huishenlab.github.io/biscuit/) output
biscuiteer_adjacent_r_functions
bisplotti
Plotting package for bisulfite sequencing and methylation arrays
crc_singlecell_dgtmatrix_objects
demultiplex
Code for demultiplexing NovaSeq, NextSeq and iSeq. There is also a separate script for single-cell atac-seq
genomics
a collection of scripts and notes related to genomics and bioinformatics
rnaseq_workflow
snakemake workflow for bulk RNA-seq workflow using STAR-edgeR
upset_rnaseq_functions_example
useful
vcflib
a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
vrc
internal
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