iamb-rwth-aachen Goto Github PK
Name: iAMB
Type: Organization
Bio: Institute of Applied Microbiology - RWTH Aachen University
Location: Germany
iAMB's Projects
biolabsim
exp2ipynb
Exp2Ipynb is a collection of Python Jupyter Notebooks for the analysis of gene expression. The input is a library of sequences with equal length mapped to associated expression strength.
opol-gsmm
Genome scale metabolic model for Ogataea polymorpha NCYC495.
pamodelpy
Repository for source code of the PAModelpy package
pathwaytoolsannotationparser
Matlab script that parses files exported from Pathway Tools for common annotations in order to complete models created with the COBRA Toolbox. This script finds those annotations that the COBRA parses misses. Before invoking the script, make sure to have imported your model of interest from a Pathway Tools SMBL file with COBRA first.
rwth-qmb1
tutorial_gem_and-_fba
Tutorial for simulation of constraint based models with CobraPy.
ustilago_maydis-gem
The genome scale metabolic model iUma22 for Ustilago maydis
yeast-gem-iambvolatiles
The consensus GEM for Saccharomyces cerevisiae. Added with volatiles from the iAMB.
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