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binder

Bio-Image Near-Duplicate Examples Repository

bioimageannotationtoolkit

Bio-Image Annotation Toolkit

coreograph

cypository

deadnet

imageforensics

Learning Manipulation-Invariant Image Similarity for Detecting Re-Use of Images in Scientific Publications

matbots

MatBots are assistants that use minimalistic GUI dialogs to guide the user through a data processing pipeline in Matlab.

mcmicro

Multiple-choice microscopy pipeline

mlrfs

Multi-Layer Random Forest [for Image] Segmentation

mlrfswcf

Multi-Layer Random Forest, with Circularity Features, for Image Segmentation

partitionofimage

An implementation of the mathematical tool known as Partition of Unity to help processing large images.

pca

https://hms-idac.github.io/PCA/

pcaabstract

https://hms-idac.github.io/PCAabstract/

pixelclassifier

A single-layer Random Forest model for pixel classification (image segmentation).

publicity

Python Bioimage Computing Toolkit

pythonpixelclassifier

Pixel Classifier (i.e. Image Segmenter) in Python

radialsymmetrylikelihood

Computes the coefficient of radial symmetry in grayscale images.

registrationbytemplatematching

Image-to-image registration by consensus of patch-to-image registrations

repressilator-colony-rings

riffleshuffle

A Supervised, Symmetry-Driven, GUI Toolkit for Mouse Brain Stack Registration and Plane Assignment

s3segmenter

s3segmentertemp

saberprobmapsegmentation

sarctrack

Sarcomere Detection and Contraction Analysis

sarctrack2

Sarcomere Detection and Contraction Analysis

symmetryviaregistration

Mirror-Symmetry Detection via Registration

unet

A TensorFlow implementation of the U-Net architecture for pixel classification (image segmentation).

unetcoreograph

Python version of Coreograph

unmicst

UNet script, model, sample data

voxelclassifier

A single-layer Random Forest model for voxel classification (volume segmentation).