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HICAI-ZJU's Projects

gs-meta icon gs-meta

Code and Data for the paper: Graph Sampling-based Meta-Learning for Molecular Property Prediction [IJCAI2023]

imold icon imold

Official implementation for Learning Invariant Molecular Representation in Latent Discrete Space (NeurIPS 2023)

instructprotein icon instructprotein

Code and data for the ACL2024 paper "InstructProtein: Aligning Human and Protein Language via Knowledge Instruction".

kano icon kano

Code and data for the Nature Machine Intelligence paper "Knowledge graph-enhanced molecular contrastive learning with functional prompt".

kano-mindspore icon kano-mindspore

MindSpore implementation for paper "Knowledge graph-enhanced molecular contrastive learning with functional prompt"

kcl icon kcl

Code and Data for the paper: Molecular Contrastive Learning with Chemical Element Knowledge Graph [AAAI 2022]

mol-instructions icon mol-instructions

Code, data and models for the ICLR2024 paper "Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models."

ontoprotein icon ontoprotein

Code and datasets for the ICLR2022 paper "OntoProtein: Protein Pretraining With Gene Ontology Embedding"

openprotein icon openprotein

Open-Protein is an open source pre-training platform that supports multiple protein pre-training models and downstream tasks.

promptprotein icon promptprotein

Code and Data for the paper: Multi-level Protein Structure Pre-training with Prompt Learning [ICLR 2023]

promptprotein-mindspore icon promptprotein-mindspore

MindSpore implementation for paper "Multi-level Protein Structure Pre-training with Prompt Learning"

prot-text-competition icon prot-text-competition

NeurIPS 2024 Competition - Scientific Large Language Models for Protein Sequence Understanding

scdeepsort icon scdeepsort

Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network

sciknoweval icon sciknoweval

SciKnowEval: Evaluating Multi-level Scientific Knowledge of Large Language Models

spatalk icon spatalk

Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data

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