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herokoking's Projects

cu-ssp icon cu-ssp

Implementation of High Quality Protein Q8 Secondary Structure Prediction by Diverse Neural Network Architectures

dlwpt-code icon dlwpt-code

Code for the book Deep Learning with PyTorch by Eli Stevens, Luca Antiga, and Thomas Viehmann.

nanopore-metagenomics icon nanopore-metagenomics

Experimental snakemake pipeline for metagenomic analysis of multiplexed whole-genome nanopore data. fast5 to figures.

open-nirs-datasets icon open-nirs-datasets

Open source data set for quantitative and qualitative analysis of near-infrared spectroscopy

pandas icon pandas

Data & Code for my video on the Pandas library of Python

phyloseq icon phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:

single-cell-tutorial icon single-cell-tutorial

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

snp2report icon snp2report

根据SNP数据库自动快速生成基因检测报告 (in Word)

state-of-the-card-2021 icon state-of-the-card-2021

State of the CARD 2021 Presentations & Demonstrations, view recorded lectures, overview, and walkthroughs.

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