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167l-materials

Materials for bioengineering 167L

aesara

Aesara is a fork of the Theano library that is maintained by the PyMC developers. It was previously named Theano-PyMC.

arviz

Exploratory analysis of Bayesian models with Python

awesome-bayes

A curated list of awesome Bayesian statistics blogs and resources

bambi

BAyesian Model-Building Interface (Bambi) in Python.

blob-explorer

Cluster image snippets in an interactive scatterplot and view them

central-limit-theorem-animation

datadrivencv

R package for building customizable CVs from spreadsheets

dbda-python

Doing Bayesian Data Analysis, 2nd Edition (Kruschke, 2015): Python/PyMC3 code

distribution_diagrams

R-script for generating canonical diagrams of distributions to be used to describe Bayesian hierarchical models.

dpananos.github.io

My blog

essays-on-data-science

In which I put together my thoughts on the practice of data science.

explained-visually

fiji

A "batteries-included" distribution of ImageJ :battery:

gecko-react

Rewrite of Citation Gecko as a React app

gp_regression

A Primer on Gaussian Processes for Regression Analysis (PyData NYC 2019)

hectormz

interrogate

Explain yourself! Interrogate a codebase for docstring coverage.

joypy

Joyplots in Python with matplotlib & pandas :chart_with_upwards_trend:

jupyter-summarytools

summarytools in jupyter notebook

jupytext

Jupyter Notebooks as Markdown Documents, Julia, Python or R scripts

matlab_imresize

Python implementation of MatLab imresize function

matplotlib

matplotlib: plotting with Python

mcmc-demo

Interactive Markov-chain Monte Carlo Javascript demos

napari

napari: a fast, interactive, multi-dimensional image viewer for python

napari-mat-images

A plugin for napari to load images from Matlab's .mat files

napari-tutorials

tutorials for the napari image viewer

pdf2doi

A python library/command-line tool to extract the DOI or other identifiers of a scientific paper from a pdf file.

pycine

Reading Vision Research .cine files with python

pyjanitor

Python implementation of R package Janitor