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bio-vcf

biopython + VCF support, based on pyVCF

ddgrupa4

drug design university project by group nr 4

git-kata

hicenterprise

Establish contact between chromatin regions!

matphylobi

a tool for automatic construction of molecular data matrix for phylogenetic inference based on GenBank records

modelo2-hpmodelsimulation

Second program for a class in molecular modelling (done in june 2016). It carries out a Monte Carlo simulation with simulated annealing for HP protein model.

modelo2-simplemd

First program for a class in molecular modelling (done in june 2016). Its an implementation of simple Molecular Dynamics for atoms with a possibility to choose from different algorithms (Verlet, VelocityVerlet, Leepfrog) and potentials (Lenard-Jones, SoftWall, min-barrier-bin).

models

Models and examples built with TensorFlow

msc-stuff

Stuff related with my Msc degree

mzsb-sensitivity_analysis

University project for a class. The task was to perform sensitivity analysis of any biological model.

nextflow-tutorial

Nextflow tutorial based on example by Paulo Di Tomaso and Emilio Palumbo: https://github.com/nextflow-io/rnatoy.git

pathways-analysis

Testing, development environment for a new project of KN BIBS

programowaniewizualizacja

Materiały do zajęć ''Programowanie w R i wizualizacja danych'' MIMUW 2016/2017

sad-zal-1

zadanie zaliczeniowe 1 ze Statystycznej Analizy Danych II

salib

Sensitivity Analysis Library in Python (Numpy). Contains Sobol, Morris, Fractional Factorial and FAST methods.

superfarmer.superdziewczyn

2 faza projektu

superfarmer3000

nasz super projekt - ukończona faza I

superfarmermapa

Projekt faza 2

tsg2-little_assembler

University class project. Fun simple assembler. Based loosely on Ben Langmead's scripts