guo-xuan Goto Github PK

acm-bcb-2019-contamination

Contains a Jupyter notebook and associated files for the tutorial on contamination in symbolic data.

acm-bcb-2019-tutorial

Slides, code, and examples for the Low-dimensional Representation of Biological Sequence Data tutorial at the ACM-BCB 2019 conference

agbonn

This repo contains the code that optimizes the AgNP synthesis using two-step machine learning

ci

This is the repo for causal inference tutorial

dam

Genome-wide Association Mapping for Multiple Groups/Populations

dche

deepwalk

DeepWalk - Deep Learning for Graphs

guo-xuan.github.io

hero

prorata

ProRata: A quantitative proteomics program for accurate protein abundance ratio estimation with confidence interval evaluation.

prosit

Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful for your research, please cite "Gessulat, Schmidt et al. 2019" DOI 10.1038/s41592-019-0426-7

public_ml_models

sipros-ensemble

Sipros Ensemble - Mateproteomic Search

sipros10filtering

siprosbenchmark

Benchmark scripts

siprosscripts

tuning_playbook

A playbook for systematically maximizing the performance of deep learning models.