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Welcome to Grégoire Siekaniec's Profile

  • 👋 Hi, I’m Gregoire
  • 💻 Favorite language: Python
  • 💼 I am a bioinformatician searching for a postdoctoral position
  • 📄 For details on my scientific background my french resume can be found here
  • 🐇 Friends of rabbits
  • 🎨 Budding draughtsman
  • 🧗 Sports: climbing, slackline, longboard

Software

ORI is available here: ORI (Oxford nanopore Reads Identification) is a software allowing, from long nanopore reads, to identify the bacterial strains present in a sample

LOTUS is available here: LOTUS (LOngiTUdinal comparative genomics Study) is a software for processing genomic data longitudinally to better understand the evolution between two or more conditions.


Grégoire Siekaniec's Projects

lotus icon lotus

LOTUS (LOngiTUdinal comparative genomics Study) is a software for processing genomic data longitudinally to better understand the evolution between two or more conditions. The input data must be a file containing the variants (.vcf) processed following the GATK best practices and annotated with Funcotator.

ori icon ori

ORI (Oxford nanopore Reads Identification) is a software allowing, from long nanopore reads, to identify the bacterial strains present in a sample.

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