goldenberg-lab Goto Github PK

alspac-sleep-and-social-behaviour

Implementations for SSM for Alspac Sleep data, and Sequential VAE for social behaviour data. Includes code for all preprocessing steps and plotting.

anonymize-slide

Delete the label from a whole-slide image

dearwatchcovid-19

ILI and COVID-19 detection using smart watches and surveys in collaboration with Evidation Health

diseasemechanism

echocg

gicell

giproject

goldenberg-lab.github.io

New lab website

hydron

immunofluorescence_pcd

jaryd_drug_deconvolution

Estimate effect of individual genes on phenotypes of interest from observed drug screen data.

joint_gp_clustering

kingsley_diseasemechanism

kulgap_app

Shiny app code for computing and visualizing PDX trajectory data.

lab_wiki

Repo for storing lab guides

lfs-age-of-onset

lfs_fibroblasts

lfs_prediction_app

Predicts the probability of cancer before 6 using methylation data and visualizes it

missing_data_imputation

This repo houses the pipeline for the missing data imputation project.

modes-of-gene-regulation

These are the scripts for the modes of gene reulation project

nc_aggregation

nsqip_codes

pyeloplasty

sam

snftool_dev

Development package for SNFtool

sorenliverdisease

All of my code for "Machine Learning to Predict Compensated Cirrhosis" Project

temporal_hydronephrosis

Comparing spatiotemporal methods for modeling kidney ultrasounds taken over time, to predict obstructive hydronephrosis.