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alcs

barcode-demultiplexing

Clustering DNA reads by barcodes from raw reads. Old code written for my master-thesis.

bigrepair

A tweaked fork of Giovanni's BigRePair (https://gitlab.com/manzai/bigrepair).

bioinformatics-algorithms-book-notes

My notes for the book Bioinformatics Algorithms by Enno Ohlebusch

bwt-tunneling

cat

HW: An implementation of Unix cat.

chordless-graphs-generator

Counting chordless cycles in undirected graphs

csfd-parser

Parser for movie pages and search on CSFD.cz

dotfiles

An attempt to organize my configs

file-system

HW: An implementation of a Unix-like file system.

fishersignatures

Offline handwritten signature recognition based on LDA

gogis0

Config files for my GitHub profile.

grammar_improved_index

Grammar Index

haskell-exam-grader

lazy_phoni

Computing matching statistics with compressed data structures

lz77-to-slp

Fast and space-efficient conversion from the LZ77 parsing to a grammar

malloc

HW: An implementation of Unix malloc.

markdown-cv

a simple template to write your CV in a readable markdown file and use CSS to publish/print it.

master-thesis

Google Scholar somehow omitted my old master thesis, so I put it here, if anyone's curious.

nostalgia-code

old-hw

Old code made for homeworks.

pfp

Rust implementation of prefix-free parsing. Mostly for Rust-learning purposes. WIP.

pfp_wg

privacy-questionnaire

quicksort-in-gnu-assembler

A small school project for System Programming class

recompression

Recompression technique of Artur Jez

rho-index

An evolved r-index for finding MEMs.

sdsl-lite

Succinct Data Structure Library 2.0

shapedslp

SLP encodings that support substring extraction

tiny-test-data

Super small biological datasets for unit testing