Comments (1)
Hi, thank you for your interests in this dataset! Please see below for the links to the short read data that we have used.
A549
- Rep1:
https://www.encodeproject.org/files/ENCFF000EJJ/@@download/ENCFF000EJJ.fastq.gz;
https://www.encodeproject.org/files/ENCFF000EJV/@@download/ENCFF000EJV.fastq.gz - Rep2:
https://www.encodeproject.org/files/ENCFF000EJW/@@download/ENCFF000EJW.fastq.gz; https://www.encodeproject.org/files/ENCFF000EKB/@@download/ENCFF000EKB.fastq.gz
HepG2
- Rep1:
https://www.encodeproject.org/files/ENCFF000FVT/@@download/ENCFF000FVT.fastq.gz;
https://www.encodeproject.org/files/ENCFF000FVU/@@download/ENCFF000FVU.fastq.gz - Rep2:
https://www.encodeproject.org/files/ENCFF000FVI/@@download/ENCFF000FVI.fastq.gz;
https://www.encodeproject.org/files/ENCFF000FVV/@@download/ENCFF000FVV.fastq.gz
K562
- Rep1:
https://www.encodeproject.org/files/ENCFF001RED/@@download/ENCFF001RED.fastq.gz;
https://www.encodeproject.org/files/ENCFF001RDZ/@@download/ENCFF001RDZ.fastq.gz - Rep2:
https://www.encodeproject.org/files/ENCFF001REG/@@download/ENCFF001REG.fastq.gz;
https://www.encodeproject.org/files/ENCFF001REF/@@download/ENCFF001REF.fastq.gz
MCF7
- Rep1:
https://www.encodeproject.org/files/ENCFF000HQR/@@download/ENCFF000HQR.fastq.gz;
https://www.encodeproject.org/files/ENCFF000HQP/@@download/ENCFF000HQP.fastq.gz - Rep2:
https://www.encodeproject.org/files/ENCFF000HQQ/@@download/ENCFF000HQQ.fastq.gz;
https://www.encodeproject.org/files/ENCFF000HRH/@@download/ENCFF000HRH.fastq.gz
Hct116
- Rep1:
end1
https://www.encodeproject.org/files/ENCFF000DKT/@@download/ENCFF000DKT.fastq.gz,
https://www.encodeproject.org/files/ENCFF000DKU/@@download/ENCFF000DKU.fastq.gz,
https://www.encodeproject.org/files/ENCFF000DKV/@@download/ENCFF000DKV.fastq.gz;
end2
https://www.encodeproject.org/files/ENCFF000DKZ/@@download/ENCFF000DKZ.fastq.gz,
https://www.encodeproject.org/files/ENCFF000DLA/@@download/ENCFF000DLA.fastq.gz,
https://www.encodeproject.org/files/ENCFF000DLB/@@download/ENCFF000DLB.fastq.gz - Rep2:
end1
https://www.encodeproject.org/files/ENCFF000DKW/@@download/ENCFF000DKW.fastq.gz,
https://www.encodeproject.org/files/ENCFF000DKX/@@download/ENCFF000DKX.fastq.gz,
https://www.encodeproject.org/files/ENCFF000DKY/@@download/ENCFF000DKY.fastq.gz;
end2
https://www.encodeproject.org/files/ENCFF000DLC/@@download/ENCFF000DLC.fastq.gz,
https://www.encodeproject.org/files/ENCFF000DLD/@@download/ENCFF000DLD.fastq.gz,
https://www.encodeproject.org/files/ENCFF000DLE/@@download/ENCFF000DLE.fastq.gz
from sg-nex-data.
Related Issues (11)
- Fast5 files HOT 3
- Data Release? HOT 2
- sample_id SGNex_MCF7-EV_directRNA_replicate2_run1 is duplicate HOT 1
- Questions about sequin used HOT 2
- Raw data in BLOW5 format HOT 10
- two fastq files were not correctly formated HOT 3
- fast5 file unable to download now HOT 13
- What kits were used for Nanopore library prep? HOT 2
- Number of PCR cycles HOT 2
- Short-read data HOT 3
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from sg-nex-data.