Comments (2)
Yes,我就是工程师口中的General computer。
Java
Conda
BigDataScript
Pipeline
Dependencies
Genome data
#########################下面一一进行,#############
- Java, Conda不必
- BigDataScript
😅解压之后是隐藏文件以为没解压
Add export PATH=$PATH:$HOME/.bds to your $HOME/.bashrc.
这里,
😕这行代码的加入位置?
😕这个加法和通常也不太一样?
- Dependencies
bash install_dependencies.sh
#坐等。紧张,饥饿。泡一杯燕麦,嘴上悠悠的喝,内心绷紧的等。:neutral_face::neutral_face::neutral_face:
#终于,恭喜我:
...
== Installing dependencies has been successfully done. ==
- Genome data
...
Creating species file... (/.../.../.../.../hg19db1/bds_atac_species.conf)
=== Genome data (hg19) has been successfully installed. ===
########################### ### 先试一个样本的
bds atac.bds -species hg19 -nth [NUM_THREADS] -fastq1_1 [READ1] -fastq1_2 [READ2]
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