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bayesian-mixed-latent-markov-models-for-binary-diagnostic-data

bootcomb

casos

This is the R implementation of the CASOS algorithm (https://doi.org/10.1002/sam.11167).

chanco_st6103

Chancellor College Module ST6103 - GLM

com_sta621_2020

covid19_mbts_serology

This is R markdown code for the analyses described in Mandolo et al (2021), SARS-CoV-2 exposure in Malawian blood donors: an analysis of seroprevalence and variant dynamics between January 2020 and July 2021, under review.

covid19_prophylaxistrial

creative-commons-markdown

Markdown-formatted Creative Commons licenses

examplepack

hepsanet

ibs_ghana_stratostg2

Materials for the STRATOS TG2 workshop held at the IBS SUSAN 2023 conference in Kumasi, Ghana.

indabax_2021

This repo contains slides and code from my talk at IndabaX Malawi in July 2021.

ipscsinsulinresistance

R code for residual expression computation, differential expression analysis and co-expression analysis for a study investigating insulin resistance pathways in iPSCs.

lstm_dltrop204_2021

Various support files for DLTROP204

marvels-pcv13

Repository contain the SAP and analysis code for the MARVELS PCV13 vaccine trial using a controlled human infection model.

matsurv_its

This repo contains the R markdown code used for the segmented regression analyses of the MatSurvey study.

openambit

openambit

pcvpa_iggcensoredregressionsplinemodelling

This is R code fitting censored regression models to IgG data with linear splines for the age predictor variable.

rhicca

This repository contains the Statistical Analysis Plan and the R analysis code for the analysis of the RHICCA study.

routeheat

uses GPX or other GPS acitivity files to create heat maps of the routes run/walked; files processing in bash, plotting in R

unima_sta623_2023

Lecture materials from the 2023 edition of the STA623 module at UNIMA.

vispig

visPIG - VISual Plotting Interface for Genetics