genopaths-africa Goto Github PK
Type: Organization
Type: Organization
:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
quality filtering tool for long reads
De novo assembler for single molecule sequencing reads using repeat graphs
GenoPaths API - REST API Server for GenoPaths Platform
Bio-informatics data visualization and analysis graphs
GenoPaths Desktop - Desktop Client for GenoPaths Platform
Bio-informatics icons
GenoPaths Platform
GenoPaths Web - GenoPaths Web Client
GenoPaths Job Executor
Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure
Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes
Sequence correction provided by ONT Research
A versatile pairwise aligner for genomic and spliced nucleotide sequences
:id: Scan contig files against PubMLST typing schemes
MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies
Plotting scripts for long read sequencing data
Visualize and perform a multitude of operations on newick files
Interactive viewer of phylogenetic trees
Pilon is an automated genome assembly improvement and variant detection tool
A k-mer based program for the identification of known plasmids from whole-genome sequencing reads
Canadian VirusSeq Data Portal
:zap: :aquarius: Rapid prokaryotic genome annotation
Genome assembly evaluation tool
transposable element typing pipeline
hybrid assembly pipeline for bacterial genomes
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.