Related Issues (20)
- Can not bind to sub-folders of /tmp in skesa container
- Missing get_seqrun.nf module
- error_corr_assembly.pl fails with some fasta headers HOT 1
- prp not found HOT 1
- No such command 'create-cdm-input', in prp HOT 6
- Add automatic installation and setup of databases as part of CI HOT 1
- Use full filenames in import statements, to enable "go to file" in some editors
- TBDB uses git ssh url, failing submodule checkout in GitHub actions
- Prodigal training files are moved in Makefile but not in config files HOT 1
- Add species Neisseria gonorrhoeae HOT 4
- Bonsai installation HOT 1
- Getting "no loop devices available" when running Jasen test on wsl2 Ubuntu HOT 2
- Add Nanopore test data
- Add QC for Nanopore data
- Check compatibility with Nanopore HOT 1
- Add profile for Enterococcus faecalis
- Add profile for Enterococcus faecium
- Add profile for Streptococcus pyogenes HOT 1
- Add profile for Acinetobacter baumannii
- Add profile for Pseudomonas aeruginosa
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