genome Goto Github PK
Name: The McDonnell Genome Institute
Type: Organization
Location: St. Louis, MO
Blog: http://genome.wustl.edu/
Name: The McDonnell Genome Institute
Type: Organization
Location: St. Louis, MO
Blog: http://genome.wustl.edu/
# Genome Genome analysis software from The Genome Institute at Washington University School of Medicine, funded by the National Human Genome Research Institute. ## Testing Running tests currently depends on many TGI resources so testing cannot be performed outside TGI at this time. Within TGI you can run tests by doing, genome-test-env test-tracker prove --lsf --git This chains the `genome-test-env` and `test-tracker` commands together. See `test-tracker prove --help` for its usage. For example, you may need to pass a value to the `--git` option if your branch is not setup to track `origin/master`.
A simplified interface to LSF built on top of existing C bindings.
Examine active users with this mcollective RPC agent.
Analyze exome data for Mendelian disorders. Still in alpha-testing.
A command line interface for the Nessy locking service.
Perl client for the nessy-server lock daemon
simple static plots of read pairing information
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.
Design documents for the PTero services
Ptero services to run commands via LSF
Perl interface to the PTero services
Petri net core of the PTero system
Ptero services to run shell commands
Client-facing API for the PTero system
This is a web client for the PTero workflow service
Puppet module for managing PostgreSQL
Workflow used for WGS/WES data QC
Given the output directory of a QC pipeline and a threshold config file, parse out the desired metrics and evalute them against the thresholds.
Commands and Modules used by the Reference Improvement group.
RefImp Scripts and Code that are Dependent on the LIMS Code and DB
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.