Comments (2)
The helm chart deliberately avoids use of the run.sh script, and therefore, conditional dependencies are not automatically installed. This is to, among other things, provide more reproducible builds where transient network failures and the like do not cause the container to fail on startup.
To handle such dependencies, please see this section: https://github.com/galaxyproject/galaxy-docker-k8s/#extending-the-image
See here for how the playbook adds defaults: https://github.com/galaxyproject/galaxy-docker-k8s/blob/e724b3a9dcb6f7be690ce643afc0507bbbad34cc/playbook.yml#L7
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Hi nuwang. Thanks for the answer! The playbook defaults look promising. I'll close it here.
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