Francesco Tabaro's Projects
Course focuses on the fundamental tools and methods for data entry, cleaning, analysis and visualisation using spreadsheets, OpenRefine and Python
Advent of code 2021
Advent of Code 2023
My Solutions for Advent of code 2022
Conda recipes for the bioconda channel.
Singularity recipes for building containers with bioinformatics tools
CellAnn
My NixOS configurations
EMBL Data Carpentries workshop 2024
My personal repository
A Yeoman generator for Snakemake pipelines
A multilingual glossary for computing and data science terms.
Singularity container for custom IGV webapp for HPC use
WebGL-based protein structure viewer
official build specifications for jupyter
Python Intro for Libraries
A Singularity container for the LuxUS tool
A Snakemake pipeline for RRBS data analysis
Padlock design pipeline for multiplexed assay with multiple probes per target in cDNA-based expression profiling
Aggregate results from bioinformatics analyses across many samples into a single report.
Test data for MultiQC. See https://github.com/ewels/MultiQC
A simple VCF file viewer written in Rust and Javascript using D3.js
Project metadata manager for PEPs in Python
Simple flask hello world for teaching purposes.
Recognition Code-Assisted Discovery of regulatory Elements v2
Rich is a Python library for rich text and beautiful formatting in the terminal.