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freemanguohua's Projects

amazon-sagemaker-protein-classification icon amazon-sagemaker-protein-classification

Implementation of Protein Classification based on subcellular localization using ProtBert(Rostlab/prot_bert_bfd_localization) model from Hugging Face library, based on BERT model trained on large corpus of protein sequences.

bert icon bert

TensorFlow code and pre-trained models for BERT

bert_papers icon bert_papers

A collection of BERT-related papers published from November 2018 to December 2019.

bertviz icon bertviz

BertViz: Visualize Attention in Transformer Models (BERT, GPT2, BART, etc.)

bionev icon bionev

Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations"

biopython icon biopython

Official git repository for Biopython (originally converted from CVS)

capsnet icon capsnet

CapsNet (from "Dynamic Routing Between Capsules") implemented in pytorch.

capsnet-tensorflow icon capsnet-tensorflow

A Tensorflow implementation of CapsNet(Capsules Net) in Hinton's paper Dynamic Routing Between Capsules

capsnet_ptm icon capsnet_ptm

CapsNet for Protein Post-translational Modification site prediction.

crotpred icon crotpred

a hidden markov model for detecting crotonyllysine sites

ctrl icon ctrl

Conditional Transformer Language Model for Controllable Generation

d2l-en icon d2l-en

An interactive deep learning book with code, math, and discussions, based on the NumPy interface.

d2l-zh icon d2l-zh

《动手学深度学习》:面向中文读者、能运行、可讨论。英文版即伯克利“深度学习导论”教材。

dash-bio icon dash-bio

Open-source bioinformatics components for Dash

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