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clampseggui

Graphical user interface allows easy access to the multiscale model-free idealization methods in the R-package clampSeg (https://cran.r-project.org/package=clampSeg). It supports the model-free segmentation methods JSMURF (https://ieeexplore.ieee.org/document/6655999), JULES (https://ieeexplore.ieee.org/document/8374882) and HILDE (https://arxiv.org/abs/2008.02658). These methods combine multiscale testing with deconvolution to idealise patch clamp recordings. They allow to deal with subconductance states and flickering.

florianpein.github.io

readabf

A package for reading ABF (binary format used by Axon pCLAMP)

simulationscrossvalidationcp

Code and results reproducing the simulations of the paper 'Cross-validation for change-point regression: pitfalls and solutions'