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romainVala avatar romainVala commented on June 24, 2024

Hello

that sound weird, I do not reproduce with for instance with
suj =tio.datasets.mni.Colin27()

I would say it comes from your image (can you share it ?)
may be the z axis is not was you think

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zhilothebest avatar zhilothebest commented on June 24, 2024

Sadly, I am unable to share the full data file due to agreements between the owner of the dataset and I. But would love help in how to implement in any other way. Ive tried isolating with x and y axis but , y axis rotates along the j index and x axis rotates along the I index.

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romainVala avatar romainVala commented on June 24, 2024

what is the shape of the data, can you report a print of the affine

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zhilothebest avatar zhilothebest commented on June 24, 2024

image

the shapes have extra axis's for an external slicer I am using instead of matplotlib.

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zhilothebest avatar zhilothebest commented on June 24, 2024

The affines were in the incorrect order. That fixed it.

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