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anibalsolon avatar clane9 avatar e-kenneally avatar hechengjin0 avatar sgiavasis avatar shnizzedy avatar xinhuili avatar

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clane9 birajstha

cpac_regtest_pack's Issues

πŸ§‘β€πŸ’» Redesign boxplot setup

Planning

No response

User interface changes

No response

Project sub-parts and estimates

  • combine into fewer charts?
  • clarify axis labels

Timeline notes

No response

Timesink notes

No response

Frustration notes

No response

Design decisions and notes

  • currently it spits out a bunch of separate files like
    bold_pipeline_1_and_pipeline_2mask_pipeline_1_and_pipeline_2motion 1D_pipeline_1_and_pipeline_2probseg_pipeline_1_and_pipeline_2sbref_pipeline_1_and_pipeline_2T1w_pipeline_1_and_pipeline_2
    (this example is just one subject. They're box-and-whisker plots when there are more subs)

♻️ Heatmap filematching is way too complicated and should be simplified

…and better match any intermediates / cross-software / cross-version matches that we care to keep tabs on

Related problem

  • The heatmap scripts are super-specific to C-PAC:fmriprep-options vs. fMRIPrep
  • Comparing outputs and intermediates is otherwise manual and piecemeal

Proposed feature

  1. Script takes two outputs paths and figures out which software was used to generate the outputs, and which depth the script needs as the root
  2. Script looks for matches and skips any non-matching outputs

Acceptance criteria

  • Script takes two outputs paths and figures out which software was used to generate the outputs, and which depth the script needs as the root
  • Script looks for matches and skips any non-matching outputs

Alternatives

No response

Additional context

No response

πŸ§‘β€πŸ’» Sprucing up filepath matching / boxplot setup

User interface changes

No response

Project sub-parts and estimates

Timeline notes

No response

Timesink notes

automated regtests

  • With the abundance of repos involved, I overlooked the variety of owners

Frustration notes

No response

Design decisions and notes

No response

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