Comments (1)
Previous discussion on where to put R4 'How to build an application ontology with ROBOT'
Emiliano : R4 should be in Chapter 5 "Recipes and Guided Examples" subsection 5.3.3 - Making data and services FAIR by design - or subsection 5.4 - FAIRification for reuse by industry - might be good places for the recipe.
Fuqi: I prefer putting all UC3 recipes in a bundle (we have around 7 ontology-related recipes), and add them together as a subsection in the cookbook. I think 3.3.1.4. Vocabulary servers and Terminology management or an extra data annotation section after 3.3.2. Conversion / Transformation services and ETL procedures might also be good to host the recipes. Putting them in subsection 5.3.3 also makes sense. But the focus will be different.
Danielle: There are a number of sections in the cookbook ToC where I think R4 might fit but not one that jumps out at me as the perfect fit. Section 5 is definitely a good option but I would also consider either "3.3.1.3. Semantic Interoperability Standards: Shared understanding" or as Fuqi suggests, an additional data annotation section after 3.3.2.
I somewhat disagree that all ontology recipes should live together since they address different aspects of UC3 and by extension, different aspects of FAIR.
from the-fair-cookbook.
Related Issues (20)
- FAIR cookbook logo - dark font
- New potential recipe for page /content/recipes/applied-examples.html
- Addition of ND4BB workflow on Knime Hub HOT 1
- wizard: enable search based on content identifier (FCb\d+)
- GitHub source code landing page points to old URL HOT 1
- Bookmarking in recipe in Zotero does not record important information
- New recipe request: Data stewardship wizard deployment HOT 1
- Footer link incorrect
- link to GitHub profiles of authors in recipes broken
- The name of Maastricht University is misspelled HOT 1
- Issue on page /content/recipes/introduction/fairification-process.html
- New recipe request: MOLGENIS
- New recipe : plant pheno data publication HOT 1
- https://faircookbook.elixir-europe.org/content/recipes/interoperability/fastq-file-format-validators.html
- Outdated link
- GitHub Link Transform Tool (handle): Issue on page /content/recipes/introduction/metadata-fair.html and others HOT 1
- Issue on page /content/recipes/infrastructure/vocabularies/Selecting_and_using_ontology_lookup_services.html
- Issue on page /content/recipes/interoperability/c4c-clinical-trials.html HOT 3
- #FCB083 is shared between two recipes HOT 3
- Making journal articles more FAIR with CiTO nanopublications HOT 2
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from the-fair-cookbook.