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an-introduction-to-bayesian-inference-in-pystan

Code for blog post on Bayesian inference in PyStan

c

This repo contains my projects in the C language

conda_environments

This repo contains different .yml files and are used for creating the different conda envs that I use on a day-to-day basis

coverageview

Bioconductor package

cpp_notes

This repo contains notes on different aspects of CPP that I have learned while doing various data analysis tasks. This repository is going to be used as a reference that I can use in the future.

data_analysis

Mainly R script to do data analysis

demo_repo

demo repo git course

elowy01.github.io

gca_1000genomes_website

The 1000genomes website

gca_elasticsearch

Tools for elasticsearch

handson-ml

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.

igsr_analysis

This repo contains code that is relevant for the analysis (Mapping, BAM qc, Variant Calling, Filtering etc...) of IGSR data

learning-terraform-3087701

This repo is for the Linkedin Learning course: Learning Terraform

logisticregression

Logistic regression from scratch in Python

nark-bone

Core utilities of nark library

nf-core-testworkflow

First workflow

perlscripts

Set of Perl scripts used in different Bioinformatics Projects

python-test-calculator

test

python_notes

Repo containing notes and snippets on how to achieve different data analyst and coding tasks using Python such as Logistic Regression, Machine Learning etc...

sphinx

Main repository for the Sphinx documentation builder

stats

Ipython notebooks and misc of things related to statistics

test

test git

useful_dockerfiles

This repo contains useful docker files to containerise dependencies

variant_filtering

supervised machine learning to filter a VCF generated using BCFTools

vcf_filtering

Filter a VCF to discard false positive variants

vcflib

a simple C++ library for parsing and manipulating VCF files, + many command-line utilities

zigzag

Python library for identifying the peaks and valleys of a time series.