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Zulko avatar Zulko commented on July 21, 2024 1

Have you tried this? I haven't tried it but it could work:

ax, _ = graphic_record.plot(figure_width=12)
x_start, x_end = ax.get_xlim()
ax.set_xlim(x_end, x_start)

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Zulko avatar Zulko commented on July 21, 2024

Got it. Not sure how easy it will be. A short term solution is to reverse your original Biopython record using record.reverse_complement() before you translate it to a graphic record. You would obtain the second figure, with the difference that the ruler's indices would be different, they would be relative to the (-) strand.

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MrTomRod avatar MrTomRod commented on July 21, 2024

It works! The function name is slightly different, get_xlim instead of get_xlims:

ax, _ = graphic_record.plot(figure_width=12)
x_start, x_end = ax.get_xlim()
ax.set_xlim(x_end, x_start)

This solves the issue for me. Thanks a lot!

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Zulko avatar Zulko commented on July 21, 2024

Yay! Matplotlib saved the day. Thanks for the use case suggestion, I'll add this to the documentation.

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