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Name: Eric Deutsch
Type: User
Company: Institute for Systems Biology
Location: Seattle, WA
Eric Deutsch's Projects
automationagent
bdqc
Big Data Quality Control
community-notebooks
Repository for Jupyter Notebooks
containers
Bioinformatics containers
fragpipe
A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data
lorikeet
Lorikeet is a JQuery plugin to view MS/MS spectra annotated with fragment ions.
mzml
Repository for mzML and the corresponding examples
ncats-reasonerstdapi
NCATS Biomedical Translator Reasoners Standard API
obofoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
proxi-schemas
ProXI: Schema definitions for the Proteomics eXpression Interface
psi-ms-cv
HUPO-PSI mass spectrometry CV
purl.obolibrary.org
A system for managing OBO PURLs
qscripts
Collection of cluster queing scripts
relay
Autonomous relay system for NCATS Biomedical Data Translator
runassessor
Assesses an MS Run mzML file for important information de novo
speclibindexing
Some code to create spectral library indexes for fast query and access
specpride
Analysis of different consensus spectrum construction methods
spectrallibraries
Some code experimenting with spectral libraries
tppaws
usi
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