Related Issues (20)
- hmmsearch error HOT 2
- 'classify/gtdbtk.ar53.classify.tree' not generated HOT 4
- [] are not present in the input list of genome to process HOT 2
- MESSAGE: Sample larger than population or is negative
- Use type strains for GTDB to NCBI taxonomy translation HOT 2
- failed to process sequence file "gzip.baggzipfile: not a gzipped file (b'>k')" and prodigal non-zero exit code HOT 4
- Not all genomes identified HOT 1
- gtdbtk.exceptions.ProdigalException: An exception was caught while running Prodigal: Prodigal returned a non-zero exit code. HOT 5
- Uncontrolled exit resulting from an unexpected error. HOT 4
- gtdbtk: error: unrecognized arguments: --mash_db HOT 1
- The annotation results of gtdbtk are inconsistent with the Phylogenetic position. HOT 4
- Error occured using gtdbtk de_novo_wf for bins HOT 5
- How to understand RELATIVE EVOLUTIONARY DIVERSION (RED)? HOT 4
- gtdb_to_ncbi_majority_vote and Unclassified Bacteria HOT 2
- Cannot open classify.tree file in Dendroscope HOT 1
- RED value and classification results HOT 4
- Error running Prodigal on genome HOT 4
- How to get a tree containing all my MAGs HOT 1
- relative evolutionary divergence (RED) values and median RED values HOT 3
- pydantic.dev/2.6/v/missing HOT 1
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