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strengejacke avatar strengejacke commented on August 20, 2024

I guess your packages are out of date?

library(modelbased)
library(glmmTMB)

data <- glmmTMB::Salamanders

model2 <- glmmTMB::glmmTMB(
  count ~ cover + mined + (1 | site),
  ziformula = ~ cover + mined,
  family = glmmTMB::truncated_poisson,
  data = data
)


estim <- modelbased::estimate_response(model2)

devtools::session_info()
#> - Session info ---------------------------------------------------------------
#>  setting  value                       
#>  version  R version 4.0.2 (2020-06-22)
#>  os       Windows 10 x64              
#>  system   x86_64, mingw32             
#>  ui       RTerm                       
#>  language (EN)                        
#>  collate  German_Germany.1252         
#>  ctype    German_Germany.1252         
#>  tz       Europe/Berlin               
#>  date     2020-10-05                  
#> 
#> - Packages -------------------------------------------------------------------
#>  package      * version  date       lib source        
#>  assertthat     0.2.1    2019-03-21 [1] CRAN (R 4.0.0)
#>  backports      1.1.10   2020-09-15 [1] CRAN (R 4.0.2)
#>  bayestestR     0.7.2.1  2020-10-02 [1] local         
#>  boot           1.3-25   2020-04-26 [2] CRAN (R 4.0.2)
#>  callr          3.4.4    2020-09-07 [1] CRAN (R 4.0.2)
#>  cli            2.0.2    2020-02-28 [1] CRAN (R 4.0.0)
#>  coda           0.19-4   2020-09-30 [1] CRAN (R 4.0.2)
#>  codetools      0.2-16   2018-12-24 [2] CRAN (R 4.0.2)
#>  crayon         1.3.4    2017-09-16 [1] CRAN (R 4.0.0)
#>  desc           1.2.0    2018-05-01 [1] CRAN (R 4.0.0)
#>  devtools       2.3.2    2020-09-18 [1] CRAN (R 4.0.2)
#>  digest         0.6.25   2020-02-23 [1] CRAN (R 4.0.0)
#>  ellipsis       0.3.1    2020-05-15 [1] CRAN (R 4.0.0)
#>  emmeans        1.5.1    2020-09-18 [1] CRAN (R 4.0.2)
#>  estimability   1.3      2018-02-11 [1] CRAN (R 4.0.0)
#>  evaluate       0.14     2019-05-28 [1] CRAN (R 4.0.0)
#>  fansi          0.4.1    2020-01-08 [1] CRAN (R 4.0.0)
#>  fs             1.5.0    2020-07-31 [1] CRAN (R 4.0.2)
#>  glmmTMB      * 1.0.2.1  2020-07-02 [1] CRAN (R 4.0.2)
#>  glue           1.4.2    2020-08-27 [1] CRAN (R 4.0.2)
#>  highr          0.8      2019-03-20 [1] CRAN (R 4.0.0)
#>  htmltools      0.5.0    2020-06-16 [1] CRAN (R 4.0.0)
#>  insight        0.9.6.1  2020-10-04 [1] local         
#>  knitr          1.30     2020-09-22 [1] CRAN (R 4.0.2)
#>  lattice        0.20-41  2020-04-02 [2] CRAN (R 4.0.2)
#>  lme4           1.1-23   2020-04-07 [1] CRAN (R 4.0.0)
#>  magrittr       1.5      2014-11-22 [1] CRAN (R 4.0.0)
#>  MASS           7.3-51.6 2020-04-26 [2] CRAN (R 4.0.2)
#>  Matrix         1.2-18   2019-11-27 [2] CRAN (R 4.0.2)
#>  memoise        1.1.0    2017-04-21 [1] CRAN (R 4.0.0)
#>  minqa          1.2.4    2014-10-09 [1] CRAN (R 4.0.0)
#>  modelbased   * 0.3.0    2020-10-05 [1] local         
#>  multcomp       1.4-14   2020-09-23 [1] CRAN (R 4.0.2)
#>  mvtnorm        1.1-1    2020-06-09 [1] CRAN (R 4.0.0)
#>  nlme           3.1-148  2020-05-24 [2] CRAN (R 4.0.2)
#>  nloptr         1.2.2.2  2020-07-02 [1] CRAN (R 4.0.2)
#>  parameters     0.8.6.1  2020-10-05 [1] local         
#>  pkgbuild       1.1.0    2020-07-13 [1] CRAN (R 4.0.2)
#>  pkgload        1.1.0    2020-05-29 [1] CRAN (R 4.0.0)
#>  prettyunits    1.1.1    2020-01-24 [1] CRAN (R 4.0.0)
#>  processx       3.4.4    2020-09-03 [1] CRAN (R 4.0.2)
#>  ps             1.3.4    2020-08-11 [1] CRAN (R 4.0.2)
#>  R6             2.4.1    2019-11-12 [1] CRAN (R 4.0.0)
#>  Rcpp           1.0.5    2020-07-06 [1] CRAN (R 4.0.2)
#>  remotes        2.2.0    2020-07-21 [1] CRAN (R 4.0.2)
#>  rlang          0.4.7    2020-07-09 [1] CRAN (R 4.0.2)
#>  rmarkdown      2.4      2020-09-30 [1] CRAN (R 4.0.2)
#>  rprojroot      1.3-2    2018-01-03 [1] CRAN (R 4.0.0)
#>  sandwich       3.0-0    2020-10-02 [1] CRAN (R 4.0.2)
#>  sessioninfo    1.1.1    2018-11-05 [1] CRAN (R 4.0.0)
#>  statmod        1.4.34   2020-02-17 [1] CRAN (R 4.0.0)
#>  stringi        1.5.3    2020-09-09 [1] CRAN (R 4.0.2)
#>  stringr        1.4.0    2019-02-10 [1] CRAN (R 4.0.0)
#>  survival       3.1-12   2020-04-10 [2] CRAN (R 4.0.2)
#>  testthat       2.3.2    2020-03-02 [1] CRAN (R 4.0.0)
#>  TH.data        1.0-10   2019-01-21 [1] CRAN (R 4.0.0)
#>  TMB            1.7.18   2020-07-27 [1] CRAN (R 4.0.2)
#>  usethis        1.6.3    2020-09-17 [1] CRAN (R 4.0.2)
#>  withr          2.3.0    2020-09-22 [1] CRAN (R 4.0.2)
#>  xfun           0.18     2020-09-29 [1] CRAN (R 4.0.2)
#>  xtable         1.8-4    2019-04-21 [1] CRAN (R 4.0.0)
#>  yaml           2.2.1    2020-02-01 [1] CRAN (R 4.0.0)
#>  zoo            1.8-8    2020-05-02 [1] CRAN (R 4.0.0)
#> 
#> [1] C:/Users/mail/Documents/R/win-library/4.0
#> [2] C:/Program Files/R/R-4.0.2/library

Created on 2020-10-05 by the reprex package (v0.3.0)

from modelbased.

DominiqueMakowski avatar DominiqueMakowski commented on August 20, 2024

indeed... the fault of my office laptop 🤷

from modelbased.

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