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rcannood avatar rcannood commented on August 15, 2024

Thanks for trying out dyno! Discussing with @zouter , this seems related to r-lib/remotes#225. This is a bug from remotes that probably occurs because one package requires dynwrap@master, while another package requires dynwrap@devel. I'm changing the depending packages so that they only require dynwrap@master, since the @devel dependency was included by mistake. I'll keep you posted!

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zouter avatar zouter commented on August 15, 2024

This should now be fixed with dynverse/dynguidelines#49 . @abotzki, can you confirm? Thanks!

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abotzki avatar abotzki commented on August 15, 2024

Hmm I just tried from scratch again: the installation stops immediately.

> devtools::install_github('dynverse/dyno')
Error: HTTP error 403.
  API rate limit exceeded for 35.241.173.168. (But here's the good news: Authenticated requests get a higher rate limit. Check out the documentation for more details.)

  Rate limit remaining: 0/60
  Rate limit reset at: 2018-12-18 14:56:52 UTC

  To increase your GitHub API rate limit
  - Use `usethis::browse_github_pat()` to create a Personal Access Token.
  - Use `usethis::edit_r_environ()` and add the token as `GITHUB_PAT`.

executing usethis::browse_github_pat() does not create a token, so automated installation remains difficult.

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rcannood avatar rcannood commented on August 15, 2024

This error is because your IP address has been making too many github api requests.

A good solution would be to create a PAT and add a GITHUB_PAT=<xx_your_pat_here_xx> entry to your ~/.Renviron file (which you can access in Rstudio with usethis::edit_r_environ()).

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abotzki avatar abotzki commented on August 15, 2024

Yes, I followed the suggestion and this works when I do it manually. I will see whether I can fix this by using an ansible script. It still looks like a workaround but I also understand that the issue with the r-lib remotes is beyond your control.

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sjkoelle avatar sjkoelle commented on August 15, 2024

I am still getting this error even when using the authentication token. The installation seems to have failed in the middle

... (installing)...
** testing if installed package keeps a record of temporary installation path

  • DONE (patchwork)
    Error: Failed to install 'unknown package' from GitHub:
    Failed to install 'unknown package' from GitHub:
    Failed to install 'unknown package' from GitHub:
    HTTP error 403.
    API rate limit exceeded for 73.53.46.198.

Some dynverse packages appear to have installed successfully, but I get the rate limit error if I try to restart.

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rcannood avatar rcannood commented on August 15, 2024

Your issue is definitely separate from that Alexander, so please create a separate github issue. I also don't have enough information to know what your problem is. Do you have a GITHUB_PAT defined somewhere? Could you provide the full log?

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sjkoelle avatar sjkoelle commented on August 15, 2024

got it resolved. thanks.

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