Comments (3)
No. Needs to be normalized to gene length (TPM, FPKM, etc.).
from xcell.
Got it, thanks!
from xcell.
Hi @dviraran, sorry to bother you again, but do you think the output of tximport with "lengthScaledTPM" option would work with xCell. It corrects both gene length and lib size. Or should I calculate TPM by only correcting for gene length? Thanks!
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