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Na Lu's Projects

3rdchimeraminer icon 3rdchimeraminer

Exploration of whole genome amplification generated chimeric sequences in long-read sequencing data

chimeraminer icon chimeraminer

ChimeraMiner: An Improved Chimeric Read Detection Pipeline and Its Application in Single Cell Sequencing.

freec icon freec

Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data

g4-miner icon g4-miner

Direct genome-wide identification of G-quadruplex structures by whole-genome resequencing

gatk-docs icon gatk-docs

Documentation archive for GATK tools and workflows

gplots icon gplots

:exclamation: This is a read-only mirror of the CRAN R package repository. gplots — Various R Programming Tools for Plotting Data. Homepage: https://github.com/talgalili/gplots Report bugs for this package: https://github.com/talgalili/gplots/issues

iterm2-color-schemes icon iterm2-color-schemes

Over 250 terminal color schemes/themes for iTerm/iTerm2. Includes ports to Terminal, Konsole, PuTTY, Xresources, XRDB, Remmina, Termite, XFCE, Tilda, FreeBSD VT, Terminator, Kitty, MobaXterm, LXTerminal, Microsoft's Windows Terminal, Visual Studio, Alacritty

juicebox icon juicebox

Visualization and analysis software for Hi-C data -

kbs icon kbs

a fork of The K Board System, The popular BBS developed by people at newsmth.net

minimap2 icon minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

mitochondrial-variation-detection icon mitochondrial-variation-detection

Scripts used in article 'A simple pipeline for heteroplasmic variation detection of the mitochondrial genome from whole genome sequencing data'

rnaseq_tutorial icon rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

road2r icon road2r

A curated list of amazingly awesome R libraries, resources and package collection.

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