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Damien Farrell's Projects

amr-project icon amr-project

notebooks and code for AMR gene detection and other tools

btbabm icon btbabm

Agent based model for bovine TB spread in herds

epitopemap icon epitopemap

A web application for visualizing MHC binding predictions

mtbdiff icon mtbdiff

Characterization of Mycobacterium tuberculosis complex species using mummer and nucdiff

pathogenie icon pathogenie

Desktop tool for microbial genome annotation and gene detection

peat icon peat

PEAT is a suite of programs for capturing, analyzing and predicting biophysical characteristics of proteins

pybioviz icon pybioviz

bioinformatics visualization tools with pyviz/bokeh

snipgenie icon snipgenie

command line and desktop tool for microbial variant calling

tablexplore icon tablexplore

Table analysis and plotting application written in PySide2/PyQt5

tkintertable icon tkintertable

A pure Python library for adding tables to a Tkinter application

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