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AlexanderDilthey avatar AlexanderDilthey commented on August 21, 2024

Hi @Lemon-Liu, does the file /public2/software/boost_1_71_0/include/boost/serialization/unordered_map.hpp exist on your system?

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Lemon-Liu avatar Lemon-Liu commented on August 21, 2024

Hi @AlexanderDilthey, I checked the path you mentioned and reinstalled the boost_1_71_0, then I run make metamaps without err messages this time:

g++ -c -O2 -ggdb -fopenmp -std=c++11 -Isrc -L /public2/software/boost_1_71_0/lib -I /public2/software/boost_1_71_0/include  -include src/common/memcpyLink.h -Wl,--wrap=memcpy -DUSE_BOOST -o src/map/mash_map.o src/map/mash_map.cpp
g++ -O2 -ggdb -fopenmp -std=c++11 -Isrc -L /public2/software/boost_1_71_0/lib -I /public2/software/boost_1_71_0/include  -include src/common/memcpyLink.h -Wl,--wrap=memcpy -DUSE_BOOST src/map/mash_map.o   -o metamaps /public2/software/boost_1_71_0/lib/libboost_math_c99.a -lstdc++ -fopenmp -lz -lm -lpthread -lboost_system -lboost_filesystem -lboost_serialization -lboost_regex

However, I got another problem while running ./metamaps:

./metamaps: error while loading shared libraries: libboost_system.so.1.71.0: cannot open shared object file: No such file or directory

I searched in the Internet but got no useful messages.
Could you please help me to fix this out? Thanks in advance.

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AlexanderDilthey avatar AlexanderDilthey commented on August 21, 2024

@Lemon-Liu Great! The problem is now that the Boost library is not found when starting MetaMaps. You should be able to fix this by adding the directory that the Boost libraries are in (assumedly /public2/software/boost_1_71_0/lib) to the environment variable LD_LIBRARY_PATH.

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Lemon-Liu avatar Lemon-Liu commented on August 21, 2024

@Lemon-Liu Great! The problem is now that the Boost library is not found when starting MetaMaps. You should be able to fix this by adding the directory that the Boost libraries are in (assumedly /public2/software/boost_1_71_0/lib) to the environment variable LD_LIBRARY_PATH.

Thanks for your kind help. It now works well!

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