Comments (3)
Hey,
first, it would be better if you used the shell script (run_fastsurfer.sh). The memory problem is most likely caused by the batch size (it is 16 by default). You can change it with the flag --batch (or --batch_size for the python script) e.g. set it to 1 to see if the problem goes away.
Best,
Leonie
from fastsurfer.
This is probably resolved. In case reducing the batch size did not solve it, we can reopen.
from fastsurfer.
This fixed it, thanks!
from fastsurfer.
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