101nights

Scripts for the 101nights project by the Dream Sessions collective.

auralbrain

Aural Brain Representation Tools

autoreject

Automated rejection and repair of bad trials/sensors in M/EEG

binauralbeats

Code used for research project. Our objective is to characterize brain responses to Binaural Beats (from brainstem responses to cortical connectivity patterns)

brainsurfacescripts

python scripts for simple operations on brain surfaces

brian2

Brian is a free, open source simulator for spiking neural networks.

cadl

Course materials/Homework materials for the Kadenze Academy course on "Creative Applications of Deep Learning w/ Tensorflow" #CADL

calblitz

Blazing fast calcium imaging analysis toolbox

cat-icecream

Analysis code for cat-icecream

chspy

Cubic Hermite Splines for Python

computational-san.github.io

Website for computational social and affective neuroscience community. Feel free to make suggestions via github issues or submit pull requests.

constrained_nmf

Python implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.

cookiecutter-data-science

A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.

datasharing

The Leek group guide to data sharing

deep-introspection

deep-introspection.github.io

My GitHub Page

eegames

First upload

eegsynth

Converting real-time EEG into sounds, music and visual effects

goatools

Python scripts to find enrichment of GO terms

hydrogen

:atom: Run code interactively, inspect data, and plot. All the power of Jupyter kernels, inside your favorite text editor.

hypyp

The Hyperscanning Python Pipeline

ipynb_output_filter

Script for stripping output from ipython/jupyter scripts

kegg-kgml-parser-python

Create a networkx.DiGraph object from a KEGG pathway file, with python

kennethenevoldsen

Personal repository

konnectomics

markdown

A Python implementation of John Gruber’s Markdown with Extension support.

matplotlib_for_papers

Handout for the tutorial "Creating publication-quality figures with matplotlib"

mffpy

Reader for EGI's MFF file format.

mne-python

MNE : Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

mne-testing-data

Data for mne-python testing