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  • šŸ‘‹ Hi, Iā€™m @DAWells
  • šŸ¦  Iā€™m interested in using multiomics and AI to treat disease
  • šŸ‘Øā€šŸ’» I'm using long/short read NGS and knowledge graphs

dawells's Projects

arviz icon arviz

Exploratory analysis of Bayesian models with Python

bottlelamp icon bottlelamp

RGB LED lighting sequences for a lamp housed in an old bottle. This lamp is powered by an arduino Pro Micro 5V.

codon_path icon codon_path

Given an amino acid sequence and a table of codon pair bias find the optimal DNA sequence encoding that polypeptide.

covid_critical_hcw icon covid_critical_hcw

Code and data associated with Critical care workers have lower seroprevalence of SARS-CoV-2 IgG compared with non-patient facing staff in first wave of COVID19

crazydoc icon crazydoc

Read DNA sequences from colourful Microsoft Word documents

dawells icon dawells

Config files for my GitHub profile.

interactive_plots icon interactive_plots

Templates for making plots which allow the user to interactively explore the data.

litmd icon litmd

Literature Review in Latex. Gather summaries of relevant papers into a literature review based on user specified tags.

pomologic icon pomologic

Download all water colours from the pomological USDA set and create an infographic

python_package_joy icon python_package_joy

Create a simple python package called `boxed`, set up tests, and run those tests using github actions, check that the package works on multiple OSs and different python versions.

rlessons icon rlessons

An introduction to R, covers plots and basic stats.

scrapeaf icon scrapeaf

Aggregate HLA allele frequencies data from allelefrequencies.net at large multi population scale

spacemap icon spacemap

Generate figures using the data available through JPL's HORIZONS system

staged-recipes icon staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

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