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abcd-spec

Application for Big Computational Data Specification (v1.1). This specification provide information on how to write an Application that can run on the open platform

app-align_hcp_to_native_space

Aligns HCP fMRI volume data in MNI space to subject space

app-analyzeprf

app-analyzeprf-gifti

app-benson14-retinotopy

Brainlife.io app for Noah Benson's neuropythy library, retinotopy from T1 anatomy

app-brainlife-example-documentation

This is an example of how to write documentation (readme.md and license.md for Apps on brainlife.io)

app-convert-wmc2wmc

App to convert the old wmc-deprecated datatype to the new wmc datatype

app-darts

app-example

app-fmriprep

runs fmriprep for brainlife

app-glmdenoise

app-hcp-pipeline

brainlife wrapper for HCP Pipelines

app-life

LiFE (Linear Fasicle Evaluation) predicts the measured diffusion signal using the orientation of the fascicles present in a connectome. LiFE uses the difference between the measured and predicted diffusion signals to measure prediction error. The connectome model prediction error is used to compute two metrics to evaluate the evidence supporting properties of the connectome.

app-life-reorient-test

app-prf

pRF for BrainLife

app-prfv2

app-qoala-t-model-a

Predicting scan Qoala-T score by using Braintime model

app-segment-tracts-between-multiple-regions

Allows tracking between different regions of the brain.

app-track-between-multiple-regions

app-wmctotrk

converts wmc (output.mat) to trk files

davhunt.github.io

dipy

Diffusion MR Imaging in Python

docker-test

docker-test1

freeview-autoload-script

A script that loops through subjects and surfaces and pulls out screenshots of different views of the brain

hcppipelines

Processing pipelines for the HCP

instruments

tool | surveys, questionnaires, inventories

mrtools

mrTools - matlab based tools for fMRI

pictures

Place to store pictures

surface_tools

Computes n equally spaced offset surfaces between the white and pial surfaces with equal ratios between areas of successive surfaces, which samples the same layers in gyri and sulci.