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Name: Dachang Dang
Type: User
Bio: Iām a Ph.D cnadiate of bioinformatics and focus on the study of computer programming, 3D Genomics
Location: China
Name: Dachang Dang
Type: User
Bio: Iām a Ph.D cnadiate of bioinformatics and focus on the study of computer programming, 3D Genomics
Location: China
Topologically associating domains (TADs) have emerged as basic structural and functional units of genome organization, and have been determined by many computational methods from Hi-C contact maps. However, the TADs obtained by different methods vary greatly, which makes the accurate determination of TADs a challenging issue and hinders subsequent biological analyses about their organization and functions. This project is about comparing different TAD-calling methods, building the TAD separation landscape and finding the consensus TADs from results of multiple methods.
dcHiC: Differential compartment analysis for Hi-C datasets
Improved implementation of diHMM in C++
A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.
A collection of tools for Hi-C data analysis
Segmentations of HiC maps into hierarchical interaction compartments
ImputeHiFI: an imputation method for single-cell multiplexed DNA FISH data by utilizing single-cell Hi-C and RNA FISH data
This is the notes of the way of machine learning study. You may find something useful in it.
Notes on single-cell Hi-C technologies, tools, and data
Unsupervised pseudotime inference through dual graph refinement for single-cell Hi-C data
A python package for identifying TAD-like domains on single-cell Hi-C data
TADGATE is a computational tool to TADGATE to identify TADs in Hi-C contact map with a graph attention autoencoder.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
š Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ššš
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ā¤ļø Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.