Comments (2)
Comparing with the example data I have found the issue: treat
was derived directly from a phyloseq object leaving the sample_data
class in the resulting data.frame.
Removing it as below seemed to have solved the issue.
treat_ps <- treat
treat<-unclass(treat_ps)
treat<-as.data.frame(treat, row.names = row.names(treat_ps))
I guess this might still be useful to someone.
Cheers
from icamp1.
Had a similar issue with phyloseq <-> iCAMP and this fix worked! Thanks
from icamp1.
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