Comments (1)
Quick notes
replicate_correlation
picks informative featurescorrelation_threshold
drops redundant featuresvariance_threshold
drops features that don't vary
So it's possible for total junk feature to survive the last two, but it won't make it past the first.
from profiling-handbook.
Related Issues (20)
- Conditional Travis Build HOT 9
- Mounting AWS Volumes in Config HOT 5
- Update instructions for using with CP3
- Package pe2loaddata HOT 1
- Document Beth's profiling workflow HOT 9
- Rewrite imaging-vms to remove private info HOT 2
- Re add infrastructure stuff to Chapter 1
- Look into if cytominer_scripts can be made public (keys in git history, etc) HOT 5
- Alter instructions to use batch file
- Update comparing Index.idx.xml to config.yml
- Update cytominer-database package HOT 2
- Stated aggregation method (mean) is inconsistent with that used in other projects HOT 9
- Define folder structures and implement data versioning HOT 7
- Move builds to JupyterBook and GH Actions HOT 2
- Add a citation file
- Handbook discrepancy: metadata/<batch> vs metadata/<batch>/platemaps HOT 8
- Handbook discrepancy: <top-level>/<batch> vs. <top-level>/images/<batch>
- Add other resources page
- Specify software versions
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from profiling-handbook.