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Chris Ulpinnis's Projects

caesar icon caesar

Encrypts and Decrypts strings in R

container-pwiz icon container-pwiz

The ProteoWizard Library and Tools are a set of modular and extensible open-source, cross-platform tools and software libraries that facilitate proteomics data analysis, developed by the Proteowizard Team at http://proteowizard.sourceforge.net/. This repository contains the Docker image to convert from many vendor raw data formats to mzML via Linux WINE.

fhirutils icon fhirutils

A python package that provides functionality for FHIR (Fast Healthcare Interoperability Resources).

metfamily icon metfamily

Understanding metabolism is fundamental in biomedical and plant research and the identification and quantification of thousands of metabolites by mass spectrometry in modern metabolomics is a prerequisite for elucidating this area. However, the identification of metabolites is a major bottleneck in traditional approaches hampering advances. Here, we present a novel approach for the untargeted discovery of metabolite families offering a bird's eye view of metabolic regulation in comparative metabolomics. We implemented the presented methodology in the easy-to-use web application MetFamily to enable the analysis of comprehensive metabolomics studies for all researchers worldwide. MetFamily is available under http://msbi.ipb-halle.de/MetFamily/.

msnbase icon msnbase

Base Classes and Functions for Mass Spectrometry and Proteomics

osem icon osem

Open Source Event Manager. An event management tool tailored to Free and Open Source Software conferences.

semanticmetabolomics icon semanticmetabolomics

A collection of converters and examples to show how Metabolomics can be a good citizen in Linked-Open-Data

tcp_established_exporter icon tcp_established_exporter

A prometheus exporter to monitor established connections to a service or host. Can be used to monitor the number of users.

xcms icon xcms

This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis

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