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advection-diffusion-matlab

amigo2r2016b

AMIGO2 R2016b - bug fixes, parallelisations and new examples will be added.

amigo_examples

bacteriaexperimentsmf.github.io

Web page to visualise experiments on real time

baygame

Bayesian inference and comparison of model structures for the Toggle Switch

bsid

Bayesian System IDentification

chemotaxisode

Code to simulate the intracellular dynamics of chemotaxis in E. coli.

cibcb2019_conference_paper_workingdirectory

This is a working folder for the analysis carried out towards the CIBCB paper on Bayesian Inference and Informative Content and Predictive Analysis.

csb_processes_paper_working_directory

This is a working folder for the analysis carried out towards the CSB paper on importance of OED over non optimal experimental design.

csynbiosys.github.io

dirac

dissertations-2021-info

This folder contains all the MSc projects of the Informatics students from 2021.

dissertations-2023-info

dissertations-2024-info

drawcircuit

drop_advdiff

drug-repurposing----b105572-msc-bioinf

Repository with the code used for B105572 MSc thesis

ethanol_ude

fp_pde_free_diffusion

free-diffusion---fp-vs-pde

gal1sys

galnetwork

h2020_code

This repository contains code from the H2020 project.

h2020_toggle_switch_amigo_repo

h2020_tsm_davidg

Modification of the original AMIGO2 scripts for the toggle switch model

h2020dsh

H2020

hxt_bay

Using the bayesian inference code developed for BayGame to fit Hexose transporters time-series data

igem-phage-modelling

iGEM Phage Modelling

imageprocessingplatforms

This repository contains all the code used for on-line and off-line image processing of yeast and bacteria microfluidic experiments.

irma-matlab

MATLAB code for IRMA