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JustinYoung's Projects

bamtools icon bamtools

C++ API & command-line toolkit for working with BAM data

bootstrap icon bootstrap

The most popular HTML, CSS, and JavaScript framework for developing responsive, mobile first projects on the web.

cactus icon cactus

Official home of genome aligner based upon notion of Cactus graphs

dfoil icon dfoil

DFOIL: Introgression Testing for Five Taxa

discover_pseudogenes icon discover_pseudogenes

Discover pseudogenes in a newly assembled genome, using reference gene/protein sequences.

evagan icon evagan

The repository is dedicated to Evasion Generative Adversarial Network source code.

extract_longest_mrna icon extract_longest_mrna

since the annotated gene always possesses more than one copy of mRNA, and we need to use a sequence of CDS to represent its gene sequce, so we need to extract the longest mRNA or CDS to perform the following analysis. here the script is suitble for extracting the sequence

gaas icon gaas

Genome Assembly and Annotation Service code

genomesyn icon genomesyn

We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a necessary complement to the study of genomic synteny and structural variation and its visualization tools.

protparcon icon protparcon

An application framework for manipulating molecular data and identifying parallel and convergent amino acid replacements at the molecular level.

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