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read.gb's Issues

possible bug in reading a field within FEATURES

Dear Mr.
Robin Mercier,

I am extracting some sequences with read.gb/extract.gb for a population genetics study and I found what it seems as a bug in "read.gb"

"read.gb" seems to skip (not write) one field in FEATURES$source.The field is named "geo_loc_name" (could be checked in ID="MW482079". I was able to exctract other fields with the code attached below. I tried to read it by downloading with "entrez_fetch" (both as character or writing in a file and re-reading it) or by direct download in entrez, so it seems is "read.gb".

I hope you could help me with a code or, better still, to implement it in "read.gb". More than 2000 sequences!

PS: It would be nice if "read.gb" could read deeper than FEATURES$source (e.g. FEATURES$source$Location$organism

Sincerely,
Daniel Toffoli

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