Comments (4)
Hi Amal, for subject 3, we skipped session 8 in the numbering when scanning, meaning we went straight from session 7 to session 9. Session 8 should in fact be empty (I think). @bpinsard any insight? @bamal you will notice that subject 3 has 13 sessions instead.
The same happened, for subject 5, session 6, we skipped from session 5 to session 7 in the naming at the console.
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it is a bit weird to skip session numbers, but I think this is not a problem for BIDS, so we will likely leave it like that. @bpinsard what did you decide on this?
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Yes it is weird, but this is neuromod, it may even give it charm. ;)
I think it is still bids valid (raises warning anyway because participant don't have the same number of session and same series in each session).
The thing is that the session have no important meaning in the current neuromod sub-datasets.
The other option is to rename all the dicoms of all the sessions after the skipped one and rerun the conversion, or rename all the BIDS files.
At some point we want to automate things, but we end up doing a lot of editing. :/
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stall issues. I don't know if that was addressed, but if not let's just keep it that way.
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Related Issues (20)
- add motion and snr stats
- switch to jupyter book?
- mention informed consent in subjects' description HOT 1
- add dataset contributors for acknowledgements HOT 1
- specify the number of anatomical images in the preprocessing HOT 1
- check if the versions of fmriprep are still correct
- check the number of BOLD runs in the preprocessing docs
- specify we had to adapt the boilerplate information for the preprocessing docs
- add copyright waiver on the documentation, similar to fmriprep
- Push pdf release of the docs on zenodo HOT 1
- create 2022-alpha tag on the doc
- create a summary paragraph of the preprocessing
- improve description of fMRI sequences HOT 2
- describe the hearing safety assesment protocol HOT 2
- fix contradiction shinobi_training and shinobi
- anat sessions
- hcptrt: additional info
- specify that subjects completed shinobi_training before entering shinobi.
- create a publication gallery
- add stats on dataset size
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