Comments (2)
Well, how to solve this problem? My chromosomes have no "chrs". They called "A01", "A02", ....
from cicero-release.
@billzt This should be solved in the latest version (1.4.2 if using monocle version and 1.3.4.7 for monocle3 version), let me know if you come across any issues
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Related Issues (20)
- Handle the case when a peak overlaps with the promoter of two or more genes HOT 1
- plot_connects() font unreadable HOT 2
- How to extract dimension data after clustering in monocle3 HOT 2
- Error in (function (classes, fdef, mtable) : unable to find an inherited method for function 'exprs' for signature '"CellDataSet"' HOT 2
- Is there any way to retrieve / assign aggregated cluster IDs to original cell labels? HOT 7
- Add ability to bin based on certain metadata
- Correlation between gene expression and cicero activity HOT 1
- [Cicero in GM12878/K562 cell lines data ] HOT 1
- interpretation of generate_ccans output HOT 1
- reduceDimension:Error in if (any(i < 0L)) { : missing value where TRUE/FALSE needed HOT 3
- every link duplicated in the results HOT 1
- no transcrition structures in plot_connection HOT 1
- run_cicero error HOT 2
- length of Dimnames[[1]] (115668) is not equal to Dim[1] (147955) HOT 2
- Hi, question about start using cicero HOT 2
- Questions about make_cicero_cds function HOT 1
- error about run_cicero HOT 2
- Plot_connection axis label HOT 1
- run_cicero Peak1 include NA HOT 2
- generate_ccans() Error: caught segfault: address 0x55e403466ee4, cause 'memory not mapped' HOT 3
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