chris-angeloni Goto Github PK

cellworld

chris-angeloni.github.io

Personal webpage, hosted on Github Pages, template based on opieters/jekyll-image-gallery-example

chronic-neuropixels

CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation

classwork

code_general

place for common functions

contrast_behavior

new repo for analysis of contrast gain control effects on behavioral percepts

course-content

Summer course content for Neuromatch Academy

disinhibitorycircuit2016

flexdrive

Compact hyperdrive for up to 16 independently movable electrodes

glmspiketools

Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).

itor_simulator

ITOR analysis for peeking behavior

jekyll-image-gallery-example

Illustrates how to integrate a highly flexible image gallery into a Jekyll blog/website.

kilosort

GPU code for spike sorting

kilosort3

Fast spike sorting with drift correction for up to a thousand channels

minfunc

unconstrained optimization tools

mpfc-pilot

neuroglm

Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).

neuropyxels

NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a pythonist who really did not want to transition to MATLAB to work with Neuropixels: it features a suite of core utility functions for loading, processing and plotting Neuropixels data.

npy-matlab

Experimental code to read/write NumPy .NPY files in MATLAB

octave-bspline

Simple Octave/MATLAB functions for B-splines

phy

Modules for manual spike sorting GUIs, ephys data analysis, visualization

phy-contrib

Manual spike sorting GUIs for klusta and template matching

plugin-gui

Open Ephys GUI with plugin architecture

sdt

spike_tutorial