Comments (3)
Hi Arcadi,
According to stderr is not a pipe
, It seems the real error of the installation is not shown. This is something related to your operation system. Probably you need to solve it first, and then the installation error will appear?
Best,
Weiyan
from landscent.
Thank you for the prompt reply, Weiyan
I can install other packages from GitHub, but not this one.
A colleague of mine, has the same problem.
Kind regards
Arcadi
from landscent.
SOLUTION TO: Failed to install 'LandSCENT' from GitHub: stderr is not a pipe
thanks to the help of a (clever) senior bioinformatician, I managed to solve the problem:
I am running R4.0.3 on macOS 10.15.7.
Apparently the package has been only tested using R3.6 on Linux 3.10.
There are a few breaking changes between R3.6.3 and R4.0, so this kind of problem will become increasingly common.
Although macOS is very similar to Linux, there are some differences in core system libraries.
Sometimes it is necessary to install additional libraries that Linux uses take for granted, but which are not included on Macs by default.
In this case, I needed: https://www.xquartz.org/
After downloading, I restarted the laptop and the installation of the package was successful.
Cheers
Arcadi
from landscent.
Related Issues (17)
- install HOT 3
- DoIntegPPI gene identifier error HOT 3
- Hi,
- Hi, HOT 2
- Out of memory HOT 4
- net13Jun12.m and net17Jan16.m contain duplicate rows and columns HOT 2
- Error: Failed to install 'unknown package' from GitHub HOT 8
- too many NULL in SR HOT 5
- Comparison between different Data sets HOT 3
- Error at the InferLandmark() step HOT 6
- CellSR.o not showing the tsne plot and DoDiffusionMap.o$root is not calculated HOT 4
- Error: Failed to install 'unknown package' from GitHub: Line starting 'Lice ...' is malformed! HOT 2
- Error while plotting boxplot and calculating InferPotency HOT 10
- Plot_DiffusionMap colour by phenotype HOT 2
- Windows does not support 'mc.cores' > 1 HOT 3
- Seurat object how to switch to a singlecellexperiment matrix to use LandSCENT?and I wonder the time about running time in 10000 cells conditions? HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from landscent.