This project forked from tandermann/snp_extraction_from_alignments
This repository contains tools for the extraction of Single Nucleotide Polymorphisms (SNPs) from multiple sequence alignments.
This repository contains tools for the extraction of Single Nucleotide Polymorphisms (SNPs) from multiple sequence alignments.
The script snps_from_uce_alignments.py can be executed from your bash command line as follows:
python2.7 bin/snps_from_uce_alignments.py --input example_files/alignments/ --config example_files/config_file.txt --phased --delimiter _ --output example_files/snps
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